BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B11LP1|AL427582
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1216 1786 0.0
>3x_Contig1216
Length = 5132
Score = 1786 bits (898), Expect = 0.0
Identities = 948/963 (98%), Gaps = 5/963 (0%)
Strand = Plus / Minus
Query: 1 gatcctaggggaagacaacaaccgccatagctactgcgctgaccccaacccccaatatga 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4407 gatcctaggggaagacaacaaccgccagagctactgcgctgaccccaacccccaatatga 4348
Query: 61 gttcagataacagtaggattatattttttattataatccttctattcttcctttcttcac 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 gtacagataacagtaggattatattttttattataatccttctattcttcctttcttcac 4288
Query: 121 cgagtggcgatggtgttacatcacagtatgaatttattcagctagagacattaaagtcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4287 cgagtggcgatggtgttacatcacagtatgaatttattcagctagagacattaaagtcgc 4228
Query: 181 aactcaaatacgagtatgaagctattccgtkaactatcgtacgaccaaaacttcagaaat 240
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 4227 aactcaaatacgagtatgaag-tattccgtgaactatcgtacgaccaaaacttcagaaat 4169
Query: 241 ataacggggctcaagcttgcgtaccatgactcawaggaaaatcccaacttgaacgctacc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4168 ataacggggctcaagcttgcgtaccatgactcaaaggaaaatcccaacttgaacgctacc 4109
Query: 301 tatccacttccacacaaggattactcttcttggaaacctaacgagaattatatkatgtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4108 tatccacttccacacaaggattactcttcttggaaacctaacgagaattatatgatgtta 4049
Query: 361 cctcaagatattatagacaaagttcaggcataatatatggaacagaaaacaaactttatt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4048 cctcaagatattatagacaaagttcagg-ataatatatggaacagaaaacaaactttatt 3990
Query: 421 tcctcccaacattaccagttatttatatggtaaaatcaatctcacagataacaataaata 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3989 tcctcccaacattaccagtaatttatatggtaaaatcaatctcacagataacaataaata 3930
Query: 481 caccaagattaagatgcctattgccaattttttcgatcctccagaatccttccaggacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3929 caccaagattaagatgcctattgccaattttttcgatcctccagaatccttccaggacga 3870
Query: 541 aaagccagcagatggtgcaacattatttggcatgcttgatgaaaggggtgatgctggcaa 600
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 3869 aaagccagcagatggtg-aacattatttggcag--ttgatgaaaggggtgatgctggcaa 3813
Query: 601 ccatggagaactacacaatgtttcttggagttatgggatagttgatgtcagtmtccaaca 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3812 ccatggagaactacacaatgtttcttggagttatgggatagttgatgtcagtatccaaca 3753
Query: 661 tttggattctgttgagaactcgttgagtttgtcaccagcttccatttcaacgggggaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3752 tttggattctgttgagaactcgttgagtttgtcaccagcttccatttcaacgggggaatc 3693
Query: 721 acagcttggagaagatgacagccattggaagattttacatttgaacgtcaacttttacaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3692 acagcttggagaagatgacagccattggaagattttacatttgaacgtcaacttttacaa 3633
Query: 781 cagagaggagacagagaagcattcgttatctactaaaggtatctatgacatatggactgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3632 cagagaggagacagagaagcattcgttatctactaaaggtatctatgacatatggactgg 3573
Query: 841 gagaattttaataatgtctcaaagtgctaagttccattctcttttcgccttcccccatta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3572 gagaattttaataatgtctcaaagtgctaagttccattctcttttcgccttcccccatta 3513
Query: 901 cttggctaacactgagaaagagttcaatcaagttaaaagattgatcgaaaagtattggra 960
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 3512 cttggctaacactgagaaagagttcaatcaagtaaaaagattgatcgaaaagtattggaa 3453
Query: 961 tgc 963
|||
Sbjct: 3452 tgc 3450
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6838
Number of Sequences: 1807
Number of extensions: 6838
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)